Carnation DB

Dca49746.1

Annotation

8-exons
f-1
sp|A9PBS3_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0016021;GO:0008233;GO:0006508;GO:0006465#1F2P1C
AT1G52600.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr1:19590612-19592486 FORWARD LENGTH=180
Repeat List (scaffold6249)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49746.1	85	194	233	31.33	110	60	7e-31
Target_name	Start	End	Length	Cov(%)
sp\|A9PBS3_POPTR	60	168	180	60.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49746.1	85	194	233	30.9	110	60	6e-31
Target_name	Start	End	Length	Cov(%)
AT1G52600.1	60	168	180	60.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6249	Augustus	mRNA	7851	11455	.	-	.	ID=Dca49746.1;Parent=Dca49746
scaffold6249	Augustus	exon	7851	7982	.	-	.	ID=Dca49746.1.exon1;Parent=Dca49746.1
scaffold6249	Augustus	exon	8767	8824	.	-	.	ID=Dca49746.1.exon2;Parent=Dca49746.1
scaffold6249	Augustus	exon	8893	9019	.	-	.	ID=Dca49746.1.exon3;Parent=Dca49746.1
scaffold6249	Augustus	exon	9164	9209	.	-	.	ID=Dca49746.1.exon4;Parent=Dca49746.1
scaffold6249	Augustus	exon	9819	9890	.	-	.	ID=Dca49746.1.exon5;Parent=Dca49746.1
scaffold6249	Augustus	exon	10841	10863	.	-	.	ID=Dca49746.1.exon6;Parent=Dca49746.1
scaffold6249	Augustus	exon	11086	11297	.	-	.	ID=Dca49746.1.exon7;Parent=Dca49746.1
scaffold6249	Augustus	exon	11424	11455	.	-	.	ID=Dca49746.1.exon8;Parent=Dca49746.1