Carnation DB

Dca49759.1

Annotation

5-exons
f-1
sp|B9HSW2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821811#GO:0005524;GO:0008026;GO:0003676#3F0P0C
sp|B9RWT5_RICCO#Dead box ATP-dependent RNA helicase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1024260#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Repeat List (scaffold625)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49759.1	185	302	339	26.54	118	77	9e-46
Target_name	Start	End	Length	Cov(%)
sp\|B9HSW2_POPTR	208	325	847	13.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49759.1	163	302	339	26.84	140	64	6e-42
Target_name	Start	End	Length	Cov(%)
AT3G16840.1	211	353	826	17.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold625	Augustus	mRNA	80400	87149	.	-	.	ID=Dca49759.1;Parent=Dca49759
scaffold625	Augustus	exon	80400	80690	.	-	.	ID=Dca49759.1.exon1;Parent=Dca49759.1
scaffold625	Augustus	exon	83528	83764	.	-	.	ID=Dca49759.1.exon2;Parent=Dca49759.1
scaffold625	Augustus	exon	84388	84533	.	-	.	ID=Dca49759.1.exon3;Parent=Dca49759.1
scaffold625	Augustus	exon	84984	84990	.	-	.	ID=Dca49759.1.exon4;Parent=Dca49759.1
scaffold625	Augustus	exon	86811	87149	.	-	.	ID=Dca49759.1.exon5;Parent=Dca49759.1