Carnation DB

Dca49832.1

Annotation

6-exons
f-1
sp|F6HT57_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g01930#GO:0003950#1F0P0C
AT1G32230.1 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615894 FORWARD LENGTH=589
Repeat List (scaffold627)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49832.1	1	590	593	43.67	590	43	3e-127
Target_name	Start	End	Length	Cov(%)
sp\|F6HT57_VITVI	25	616	623	95.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49832.1	1	592	593	38.78	592	37	1e-99
Target_name	Start	End	Length	Cov(%)
AT1G32230.1	1	586	589	99.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold627	Augustus	mRNA	21020	25727	.	+	.	ID=Dca49832.1;Parent=Dca49832
scaffold627	Augustus	exon	21020	22119	.	+	.	ID=Dca49832.1.exon1;Parent=Dca49832.1
scaffold627	Augustus	exon	22610	22851	.	+	.	ID=Dca49832.1.exon2;Parent=Dca49832.1
scaffold627	Augustus	exon	23153	23253	.	+	.	ID=Dca49832.1.exon3;Parent=Dca49832.1
scaffold627	Augustus	exon	23600	23785	.	+	.	ID=Dca49832.1.exon4;Parent=Dca49832.1
scaffold627	Augustus	exon	23876	23971	.	+	.	ID=Dca49832.1.exon5;Parent=Dca49832.1
scaffold627	Augustus	exon	25671	25727	.	+	.	ID=Dca49832.1.exon6;Parent=Dca49832.1