Carnation DB

Dca4986.1

Annotation

5-exons
f-1
sp|A9PCY8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827303#GO:0005634;GO:0046983;GO:0009734;GO:0006355;GO:0006351#1F3P1C
sp|B9SZ69_RICCO#Auxin-responsive protein IAA16, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0484470#GO:0005634;GO:0046983;GO:0009734;GO:0006355;GO:0006351#1F3P1C
Repeat List (scaffold119)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4986.1	6	271	271	63.46	266	65	6e-91
Target_name	Start	End	Length	Cov(%)
sp\|A9PCY8_POPTR	16	250	250	94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4986.1	6	271	271	61.62	266	62	2e-82
Target_name	Start	End	Length	Cov(%)
AT3G04730.1	2	236	236	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold119	Augustus	mRNA	236432	240429	.	+	.	ID=Dca4986.1;Parent=Dca4986
scaffold119	Augustus	exon	236432	236754	.	+	.	ID=Dca4986.1.exon1;Parent=Dca4986.1
scaffold119	Augustus	exon	239478	239731	.	+	.	ID=Dca4986.1.exon2;Parent=Dca4986.1
scaffold119	Augustus	exon	239972	240110	.	+	.	ID=Dca4986.1.exon3;Parent=Dca4986.1
scaffold119	Augustus	exon	240213	240274	.	+	.	ID=Dca4986.1.exon4;Parent=Dca4986.1
scaffold119	Augustus	exon	240392	240429	.	+	.	ID=Dca4986.1.exon5;Parent=Dca4986.1