Carnation DB

Dca49865.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os09t0122300-01 Similar to Zinc knuckle family protein.
Repeat List (scaffold628)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49865.1	4	234	624	14.9	231	34	4e-41
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	9	284	1717	16.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49865.1	397	477	624	4.96	81	39	3e-10
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	177	192	41.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold628	Augustus	mRNA	49756	52396	.	-	.	ID=Dca49865.1;Parent=Dca49865
scaffold628	Augustus	exon	49756	49967	.	-	.	ID=Dca49865.1.exon1;Parent=Dca49865.1
scaffold628	Augustus	exon	50130	50354	.	-	.	ID=Dca49865.1.exon2;Parent=Dca49865.1
scaffold628	Augustus	exon	50481	51212	.	-	.	ID=Dca49865.1.exon3;Parent=Dca49865.1
scaffold628	Augustus	exon	51538	51949	.	-	.	ID=Dca49865.1.exon4;Parent=Dca49865.1
scaffold628	Augustus	exon	52103	52396	.	-	.	ID=Dca49865.1.exon5;Parent=Dca49865.1