Dca49872.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6280)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49872.1 |
15 |
471 |
479 |
32.35 |
457 |
32 |
4e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
11 |
504 |
1296 |
38.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49872.1 |
15 |
302 |
479 |
18.58 |
288 |
31 |
6e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G34070.1 |
10 |
285 |
308 |
89.61 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6280 |
Augustus |
mRNA |
1 |
1528 |
. |
- |
. |
ID=Dca49872.1;Parent=Dca49872 |
| scaffold6280 |
Augustus |
exon |
1 |
365 |
. |
- |
. |
ID=Dca49872.1.exon1;Parent=Dca49872.1 |
| scaffold6280 |
Augustus |
exon |
455 |
1528 |
. |
- |
. |
ID=Dca49872.1.exon2;Parent=Dca49872.1 |
