Carnation DB

Dca49905.1

Annotation

5-exons
f-1
sp|B9NAB0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_674730#unknown#0F0P0C
sp|G7IH36_MEDTR#Mitotic spindle assembly checkpoint protein MAD2B#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g069340#unknown#0F0P0C
Repeat List (scaffold6292)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49905.1	1	201	204	65.19	201	67	2e-76
Target_name	Start	End	Length	Cov(%)
sp\|B9NAB0_POPTR	1	198	207	95.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49905.1	1	199	204	58.33	199	60	2e-67
Target_name	Start	End	Length	Cov(%)
AT1G16590.1	1	198	215	92.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6292	Augus-PASA	mRNA	28252	29790	.	-	.	ID=Dca49905.1;Parent=Dca49905
scaffold6292	Augus-PASA	exon	28252	28451	.	-	.	ID=Dca49905.1.exon1;Parent=Dca49905.1
scaffold6292	Augus-PASA	exon	28567	28756	.	-	.	ID=Dca49905.1.exon2;Parent=Dca49905.1
scaffold6292	Augus-PASA	exon	29187	29299	.	-	.	ID=Dca49905.1.exon3;Parent=Dca49905.1
scaffold6292	Augus-PASA	exon	29596	29676	.	-	.	ID=Dca49905.1.exon4;Parent=Dca49905.1
scaffold6292	Augustus	exon	29760	29790	.	-	.	ID=Dca49905.1.exon5;Parent=Dca49905.1