Carnation DB

Dca49918.1

Annotation

7-exons
f-1
sp|D7KZS0_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_897449#unknown#0F0P0C
Os01t0144340-00 Similar to Actin-related protein 5.
Repeat List (scaffold6299)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49918.1	1	389	397	63.47	389	55	4e-114
Target_name	Start	End	Length	Cov(%)
sp\|D7KZS0_ARALL	97	555	724	63.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49918.1	1	389	397	63.22	389	55	7e-116
Target_name	Start	End	Length	Cov(%)
Os01t0144340-00	97	549	715	63.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6299	Augustus	mRNA	1229	4719	.	-	.	ID=Dca49918.1;Parent=Dca49918
scaffold6299	Augustus	exon	1229	1595	.	-	.	ID=Dca49918.1.exon1;Parent=Dca49918.1
scaffold6299	Augustus	exon	2291	2418	.	-	.	ID=Dca49918.1.exon2;Parent=Dca49918.1
scaffold6299	Augustus	exon	2570	3001	.	-	.	ID=Dca49918.1.exon3;Parent=Dca49918.1
scaffold6299	Augustus	exon	3800	3909	.	-	.	ID=Dca49918.1.exon4;Parent=Dca49918.1
scaffold6299	Augustus	exon	4059	4161	.	-	.	ID=Dca49918.1.exon5;Parent=Dca49918.1
scaffold6299	Augustus	exon	4427	4471	.	-	.	ID=Dca49918.1.exon6;Parent=Dca49918.1
scaffold6299	Augustus	exon	4711	4719	.	-	.	ID=Dca49918.1.exon7;Parent=Dca49918.1