Carnation DB

Dca49983.1

Annotation

7-exons
f-1
sp|B9RQK7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1493800#GO:0005089#1F0P0C
AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotide exchange factor 8 | chr3:8980695-8982793 REVERSE LENGTH=523
Repeat List (scaffold630)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49983.1	16	462	462	67.31	447	68	4e-173
Target_name	Start	End	Length	Cov(%)
sp\|B9RQK7_RICCO	102	554	554	81.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49983.1	9	462	462	61.68	454	61	1e-161
Target_name	Start	End	Length	Cov(%)
AT3G24620.1	75	523	523	85.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold630	Augustus	mRNA	122319	124433	.	-	.	ID=Dca49983.1;Parent=Dca49983
scaffold630	Augustus	exon	122319	122708	.	-	.	ID=Dca49983.1.exon1;Parent=Dca49983.1
scaffold630	Augustus	exon	122796	123116	.	-	.	ID=Dca49983.1.exon2;Parent=Dca49983.1
scaffold630	Augustus	exon	123202	123477	.	-	.	ID=Dca49983.1.exon3;Parent=Dca49983.1
scaffold630	Augustus	exon	123573	123647	.	-	.	ID=Dca49983.1.exon4;Parent=Dca49983.1
scaffold630	Augustus	exon	123751	123905	.	-	.	ID=Dca49983.1.exon5;Parent=Dca49983.1
scaffold630	Augustus	exon	124164	124280	.	-	.	ID=Dca49983.1.exon6;Parent=Dca49983.1
scaffold630	Augustus	exon	124379	124433	.	-	.	ID=Dca49983.1.exon7;Parent=Dca49983.1