Carnation DB

Dca50017.1

Annotation

9-exons
f-1
sp|B9IEM4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_733232#unknown#0F0P0C
Os03t0436300-00 Similar to calmodulin binding protein.
Repeat List (scaffold631)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50017.1	75	493	597	45.72	419	65	1e-158
Target_name	Start	End	Length	Cov(%)
sp\|B9IEM4_POPTR	1	424	424	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50017.1	1	523	597	41.54	523	46	5e-124
Target_name	Start	End	Length	Cov(%)
Os03t0436300-00	58	592	630	84.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold631	Augustus	mRNA	34482	42099	.	-	.	ID=Dca50017.1;Parent=Dca50017
scaffold631	Augustus	exon	34482	34558	.	-	.	ID=Dca50017.1.exon1;Parent=Dca50017.1
scaffold631	Augustus	exon	34931	35079	.	-	.	ID=Dca50017.1.exon2;Parent=Dca50017.1
scaffold631	Augustus	exon	35832	36310	.	-	.	ID=Dca50017.1.exon3;Parent=Dca50017.1
scaffold631	Augustus	exon	36564	36770	.	-	.	ID=Dca50017.1.exon4;Parent=Dca50017.1
scaffold631	Augustus	exon	37323	37483	.	-	.	ID=Dca50017.1.exon5;Parent=Dca50017.1
scaffold631	Augustus	exon	38069	38559	.	-	.	ID=Dca50017.1.exon6;Parent=Dca50017.1
scaffold631	Augustus	exon	38918	38970	.	-	.	ID=Dca50017.1.exon7;Parent=Dca50017.1
scaffold631	Augustus	exon	39908	39974	.	-	.	ID=Dca50017.1.exon8;Parent=Dca50017.1
scaffold631	Augustus	exon	41990	42099	.	-	.	ID=Dca50017.1.exon9;Parent=Dca50017.1