Dca50072.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold6322)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50072.1 |
3 |
138 |
386 |
25.38 |
136 |
52 |
3e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
644 |
833 |
1553 |
12.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50072.1 |
3 |
145 |
386 |
18.91 |
143 |
38 |
5e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
642 |
834 |
1539 |
12.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6322 |
Augustus |
mRNA |
6220 |
8937 |
. |
+ |
. |
ID=Dca50072.1;Parent=Dca50072 |
| scaffold6322 |
Augustus |
exon |
6220 |
6496 |
. |
+ |
. |
ID=Dca50072.1.exon1;Parent=Dca50072.1 |
| scaffold6322 |
Augustus |
exon |
6659 |
6797 |
. |
+ |
. |
ID=Dca50072.1.exon2;Parent=Dca50072.1 |
| scaffold6322 |
Augustus |
exon |
8193 |
8937 |
. |
+ |
. |
ID=Dca50072.1.exon3;Parent=Dca50072.1 |
