Dca50073.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold6322)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50073.1 |
1 |
513 |
524 |
60.11 |
513 |
55 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
610 |
1179 |
1501 |
37.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50073.1 |
3 |
506 |
524 |
33.96 |
504 |
32 |
3e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
642 |
1163 |
1539 |
33.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6322 |
Augustus |
mRNA |
9040 |
12575 |
. |
+ |
. |
ID=Dca50073.1;Parent=Dca50073 |
| scaffold6322 |
Augustus |
exon |
9040 |
9316 |
. |
+ |
. |
ID=Dca50073.1.exon1;Parent=Dca50073.1 |
| scaffold6322 |
Augustus |
exon |
9479 |
9617 |
. |
+ |
. |
ID=Dca50073.1.exon2;Parent=Dca50073.1 |
| scaffold6322 |
Augustus |
exon |
11295 |
12396 |
. |
+ |
. |
ID=Dca50073.1.exon3;Parent=Dca50073.1 |
| scaffold6322 |
Augustus |
exon |
12519 |
12575 |
. |
+ |
. |
ID=Dca50073.1.exon4;Parent=Dca50073.1 |
