Dca50088.1
Annotation
- 3-exons
- f-1
- sp|B9H570_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558577#GO:0016021;GO:0005524;GO:0004674#2F0P1C
- Os11t0569300-00 Serine/threonine protein kinase domain containing protein.
- Repeat List (scaffold633)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50088.1 |
3 |
138 |
530 |
9.81 |
136 |
38 |
4e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H570_POPTR |
77 |
211 |
1011 |
13.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50088.1 |
35 |
138 |
530 |
7.35 |
104 |
36 |
6e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0216000-00 |
64 |
167 |
1164 |
8.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold633 |
Augustus |
mRNA |
46723 |
48536 |
. |
+ |
. |
ID=Dca50088.1;Parent=Dca50088 |
| scaffold633 |
Augustus |
exon |
46723 |
47890 |
. |
+ |
. |
ID=Dca50088.1.exon1;Parent=Dca50088.1 |
| scaffold633 |
Augustus |
exon |
48022 |
48432 |
. |
+ |
. |
ID=Dca50088.1.exon2;Parent=Dca50088.1 |
| scaffold633 |
Augustus |
exon |
48523 |
48536 |
. |
+ |
. |
ID=Dca50088.1.exon3;Parent=Dca50088.1 |
