Dca50163.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6341)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50163.1 |
1 |
296 |
378 |
51.05 |
296 |
65 |
1e-114
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
45 |
341 |
964 |
30.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50163.1 |
35 |
290 |
378 |
28.04 |
256 |
41 |
3e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
751 |
1428 |
18.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6341 |
Augustus |
mRNA |
15906 |
26605 |
. |
- |
. |
ID=Dca50163.1;Parent=Dca50163 |
| scaffold6341 |
Augustus |
exon |
15906 |
16174 |
. |
- |
. |
ID=Dca50163.1.exon1;Parent=Dca50163.1 |
| scaffold6341 |
Augustus |
exon |
25738 |
26605 |
. |
- |
. |
ID=Dca50163.1.exon2;Parent=Dca50163.1 |
