Dca50177.1
Annotation
- 4-exons
- f-1
- sp|A5AIJ8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_031733#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold6348)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50177.1 |
2 |
683 |
695 |
47.76 |
682 |
43 |
6e-170
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AIJ8_VITVI |
545 |
1315 |
1322 |
58.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50177.1 |
2 |
669 |
695 |
33.66 |
668 |
31 |
3e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
603 |
1378 |
1401 |
55.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6348 |
Augustus |
mRNA |
10542 |
13013 |
. |
- |
. |
ID=Dca50177.1;Parent=Dca50177 |
| scaffold6348 |
Augustus |
exon |
10542 |
11593 |
. |
- |
. |
ID=Dca50177.1.exon1;Parent=Dca50177.1 |
| scaffold6348 |
Augustus |
exon |
11687 |
11797 |
. |
- |
. |
ID=Dca50177.1.exon2;Parent=Dca50177.1 |
| scaffold6348 |
Augustus |
exon |
11885 |
12119 |
. |
- |
. |
ID=Dca50177.1.exon3;Parent=Dca50177.1 |
| scaffold6348 |
Augustus |
exon |
12324 |
13013 |
. |
- |
. |
ID=Dca50177.1.exon4;Parent=Dca50177.1 |
