Dca50181.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold635)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50181.1 |
1 |
255 |
300 |
60 |
255 |
61 |
1e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
880 |
1178 |
1313 |
22.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50181.1 |
2 |
281 |
300 |
34.66 |
280 |
33 |
2e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1002 |
1308 |
1428 |
21.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold635 |
Augustus |
mRNA |
12299 |
13334 |
. |
+ |
. |
ID=Dca50181.1;Parent=Dca50181 |
| scaffold635 |
Augustus |
exon |
12299 |
12813 |
. |
+ |
. |
ID=Dca50181.1.exon1;Parent=Dca50181.1 |
| scaffold635 |
Augustus |
exon |
12947 |
13334 |
. |
+ |
. |
ID=Dca50181.1.exon2;Parent=Dca50181.1 |
