Carnation DB

Dca50236.1

Annotation

7-exons
f-1
sp|B9HWA4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_880253#GO:0015297;GO:0015238#2F0P0C
AT1G15160.1 | Symbols: | MATE efflux family protein | chr1:5215475-5217545 FORWARD LENGTH=487
Repeat List (scaffold636)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50236.1	1	475	485	67.21	475	68	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HWA4_POPTR	1	480	482	99.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50236.1	12	465	485	54.43	454	58	4e-164
Target_name	Start	End	Length	Cov(%)
AT1G15160.1	13	472	487	94.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold636	Augustus	mRNA	88921	94718	.	+	.	ID=Dca50236.1;Parent=Dca50236
scaffold636	Augustus	exon	88921	89157	.	+	.	ID=Dca50236.1.exon1;Parent=Dca50236.1
scaffold636	Augustus	exon	90272	90816	.	+	.	ID=Dca50236.1.exon2;Parent=Dca50236.1
scaffold636	Augustus	exon	92822	92908	.	+	.	ID=Dca50236.1.exon3;Parent=Dca50236.1
scaffold636	Augus-PASA	exon	93204	93260	.	+	.	ID=Dca50236.1.exon4;Parent=Dca50236.1
scaffold636	Augus-PASA	exon	93360	93598	.	+	.	ID=Dca50236.1.exon5;Parent=Dca50236.1
scaffold636	Augus-PASA	exon	93697	93902	.	+	.	ID=Dca50236.1.exon6;Parent=Dca50236.1
scaffold636	Augus-PASA	exon	94632	94718	.	+	.	ID=Dca50236.1.exon7;Parent=Dca50236.1