Dca50242.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold636)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50242.1 |
3 |
140 |
176 |
48.86 |
138 |
63 |
9e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
864 |
1000 |
1501 |
9.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50242.1 |
9 |
110 |
176 |
19.88 |
102 |
35 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
895 |
996 |
1539 |
6.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold636 |
Augustus |
mRNA |
116515 |
117686 |
. |
+ |
. |
ID=Dca50242.1;Parent=Dca50242 |
| scaffold636 |
Augustus |
exon |
116515 |
116964 |
. |
+ |
. |
ID=Dca50242.1.exon1;Parent=Dca50242.1 |
| scaffold636 |
Augustus |
exon |
117606 |
117686 |
. |
+ |
. |
ID=Dca50242.1.exon2;Parent=Dca50242.1 |
