Dca50248.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6363)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50248.1 |
195 |
304 |
320 |
22.18 |
110 |
65 |
2e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
812 |
921 |
964 |
11.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50248.1 |
130 |
304 |
320 |
16.56 |
175 |
30 |
5e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1205 |
1381 |
1428 |
12.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6363 |
Augustus |
mRNA |
3659 |
5976 |
. |
+ |
. |
ID=Dca50248.1;Parent=Dca50248 |
| scaffold6363 |
Augustus |
exon |
3659 |
4238 |
. |
+ |
. |
ID=Dca50248.1.exon1;Parent=Dca50248.1 |
| scaffold6363 |
Augustus |
exon |
5594 |
5976 |
. |
+ |
. |
ID=Dca50248.1.exon2;Parent=Dca50248.1 |
