Carnation DB

Dca50249.1

Annotation

3-exons
f-1
sp|B9N3J0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580943#unknown#0F0P0C
Repeat List (scaffold6363)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50249.1	1	91	92	60.86	91	60	1e-19
Target_name	Start	End	Length	Cov(%)
sp\|B9N3J0_POPTR	1	93	98	94.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50249.1	4	91	92	51.08	88	53	6e-15
Target_name	Start	End	Length	Cov(%)
AT2G33847.1	1	88	93	94.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6363	Augustus	mRNA	6171	10307	.	+	.	ID=Dca50249.1;Parent=Dca50249
scaffold6363	Augustus	exon	6171	6319	.	+	.	ID=Dca50249.1.exon1;Parent=Dca50249.1
scaffold6363	Augustus	exon	6642	6763	.	+	.	ID=Dca50249.1.exon2;Parent=Dca50249.1
scaffold6363	Augustus	exon	10300	10307	.	+	.	ID=Dca50249.1.exon3;Parent=Dca50249.1
scaffold6363	Augustus	mRNA	6171	8274	.	+	.	ID=Dca50249.2;Parent=Dca50249
scaffold6363	Augustus	exon	6171	6319	.	+	.	ID=Dca50249.2.exon1;Parent=Dca50249.2
scaffold6363	Augustus	exon	6642	6763	.	+	.	ID=Dca50249.2.exon2;Parent=Dca50249.2
scaffold6363	Augustus	exon	8255	8274	.	+	.	ID=Dca50249.2.exon3;Parent=Dca50249.2