Dca50254.1
Annotation
- 3-exons
- f-3
- sp|A9PGB8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1083864#unknown#0F0P0C
- AT5G65470.1 | Symbols: | O-fucosyltransferase family protein | chr5:26172432-26174904 FORWARD LENGTH=504
- Repeat List (scaffold6367)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50254.1 |
1 |
139 |
150 |
81.33 |
139 |
88 |
6e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PGB8_POPTR |
332 |
470 |
506 |
27.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50254.1 |
1 |
139 |
150 |
78 |
139 |
85 |
7e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G65470.1 |
330 |
468 |
504 |
27.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6367 |
Augustus |
mRNA |
1 |
687 |
. |
+ |
. |
ID=Dca50254.1;Parent=Dca50254 |
| scaffold6367 |
Augustus |
exon |
1 |
122 |
. |
+ |
. |
ID=Dca50254.1.exon1;Parent=Dca50254.1 |
| scaffold6367 |
Augustus |
exon |
254 |
451 |
. |
+ |
. |
ID=Dca50254.1.exon2;Parent=Dca50254.1 |
| scaffold6367 |
Augustus |
exon |
553 |
687 |
. |
+ |
. |
ID=Dca50254.1.exon3;Parent=Dca50254.1 |
