Dca5028.1
Annotation
- 3-exons
- f-1
- sp|Q6Y8E6_SILLA#Ac-like transposase THELMA13#Silene latifolia (White campion) (Bladder campion)#Name=Thelma13#GO:0003677;GO:0046983#2F0P0C
- Repeat List (scaffold11913)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5028.1 |
1 |
177 |
250 |
38.4 |
177 |
55 |
2e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6Y8E6_SILLA |
465 |
641 |
682 |
25.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5028.1 |
1 |
183 |
250 |
30.8 |
183 |
38 |
9e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0521366-00 |
467 |
664 |
763 |
25.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11913 |
Augustus |
mRNA |
8 |
980 |
. |
+ |
. |
ID=Dca5028.1;Parent=Dca5028 |
| scaffold11913 |
Augustus |
exon |
8 |
265 |
. |
+ |
. |
ID=Dca5028.1.exon1;Parent=Dca5028.1 |
| scaffold11913 |
Augustus |
exon |
370 |
685 |
. |
+ |
. |
ID=Dca5028.1.exon2;Parent=Dca5028.1 |
| scaffold11913 |
Augustus |
exon |
802 |
980 |
. |
+ |
. |
ID=Dca5028.1.exon3;Parent=Dca5028.1 |
