Carnation DB

Dca50293.1

Annotation

8-exons
f-1
sp|F6HVD6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0084g00830#unknown#0F0P0C
Os01t0272600-01 Similar to Root determined nodulation 1.
Repeat List (scaffold638)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50293.1	8	355	357	64.14	348	64	9e-133
Target_name	Start	End	Length	Cov(%)
sp\|F6HVD6_VITVI	7	360	362	97.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50293.1	19	357	357	59.1	339	62	1e-124
Target_name	Start	End	Length	Cov(%)
AT5G13500.1	18	358	358	95.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold638	Augustus	mRNA	44252	47468	.	-	.	ID=Dca50293.1;Parent=Dca50293
scaffold638	Augustus	exon	44252	44314	.	-	.	ID=Dca50293.1.exon1;Parent=Dca50293.1
scaffold638	Augustus	exon	44460	44573	.	-	.	ID=Dca50293.1.exon2;Parent=Dca50293.1
scaffold638	Augustus	exon	44661	44732	.	-	.	ID=Dca50293.1.exon3;Parent=Dca50293.1
scaffold638	Augustus	exon	44822	44891	.	-	.	ID=Dca50293.1.exon4;Parent=Dca50293.1
scaffold638	Augustus	exon	44971	45068	.	-	.	ID=Dca50293.1.exon5;Parent=Dca50293.1
scaffold638	Augustus	exon	45152	45353	.	-	.	ID=Dca50293.1.exon6;Parent=Dca50293.1
scaffold638	Augustus	exon	45438	45505	.	-	.	ID=Dca50293.1.exon7;Parent=Dca50293.1
scaffold638	Augustus	exon	47082	47468	.	-	.	ID=Dca50293.1.exon8;Parent=Dca50293.1