Carnation DB

Dca50380.1

Annotation

7-exons
f-1
sp|D7SHM2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g08920#GO:0000166;GO:0016491#2F0P0C
sp|Q9FG98_ARATH#Ribitol dehydrogenase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0000166;GO:0016491#2F0P0C
Repeat List (scaffold64)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50380.1	1	295	296	69.59	295	63	3e-115
Target_name	Start	End	Length	Cov(%)
sp\|D7SHM2_VITVI	1	329	330	99.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50380.1	1	290	296	70.6	290	65	1e-114
Target_name	Start	End	Length	Cov(%)
AT5G50130.1	1	326	339	96.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold64	Augustus	mRNA	256976	260957	.	-	.	ID=Dca50380.1;Parent=Dca50380
scaffold64	Augustus	exon	256976	257164	.	-	.	ID=Dca50380.1.exon1;Parent=Dca50380.1
scaffold64	Augustus	exon	257950	257979	.	-	.	ID=Dca50380.1.exon2;Parent=Dca50380.1
scaffold64	Augus-PASA	exon	258100	258178	.	-	.	ID=Dca50380.1.exon3;Parent=Dca50380.1
scaffold64	Augus-PASA	exon	258696	258849	.	-	.	ID=Dca50380.1.exon4;Parent=Dca50380.1
scaffold64	Augus-PASA	exon	259482	259561	.	-	.	ID=Dca50380.1.exon5;Parent=Dca50380.1
scaffold64	Augus-PASA	exon	259692	259923	.	-	.	ID=Dca50380.1.exon6;Parent=Dca50380.1
scaffold64	Augus-PASA	exon	260831	260957	.	-	.	ID=Dca50380.1.exon7;Parent=Dca50380.1