Carnation DB

Dca50420.1

Annotation

12-exons
f-1
sp|D7T4Y3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0118g00470#GO:0008270#1F0P0C
AT5G20350.1 | Symbols: TIP1 | Ankyrin repeat family protein with DHHC zinc finger domain | chr5:6876772-6881102 FORWARD LENGTH=620
Repeat List (scaffold640)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50420.1	1	613	614	73.45	613	71	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T4Y3_VITVI	1	634	635	99.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50420.1	1	613	614	68.24	613	67	0
Target_name	Start	End	Length	Cov(%)
AT5G20350.1	1	619	620	99.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold640	Augustus	mRNA	21302	27568	.	+	.	ID=Dca50420.1;Parent=Dca50420
scaffold640	Augustus	exon	21302	21568	.	+	.	ID=Dca50420.1.exon1;Parent=Dca50420.1
scaffold640	Augustus	exon	22509	22649	.	+	.	ID=Dca50420.1.exon2;Parent=Dca50420.1
scaffold640	Augustus	exon	24143	24255	.	+	.	ID=Dca50420.1.exon3;Parent=Dca50420.1
scaffold640	Augustus	exon	24778	24857	.	+	.	ID=Dca50420.1.exon4;Parent=Dca50420.1
scaffold640	Augustus	exon	24954	25117	.	+	.	ID=Dca50420.1.exon5;Parent=Dca50420.1
scaffold640	Augustus	exon	25613	25767	.	+	.	ID=Dca50420.1.exon6;Parent=Dca50420.1
scaffold640	Augustus	exon	25836	25935	.	+	.	ID=Dca50420.1.exon7;Parent=Dca50420.1
scaffold640	Augustus	exon	26209	26286	.	+	.	ID=Dca50420.1.exon8;Parent=Dca50420.1
scaffold640	Augustus	exon	26381	26479	.	+	.	ID=Dca50420.1.exon9;Parent=Dca50420.1
scaffold640	Augustus	exon	26637	26715	.	+	.	ID=Dca50420.1.exon10;Parent=Dca50420.1
scaffold640	Augus-PASA	exon	26817	26965	.	+	.	ID=Dca50420.1.exon11;Parent=Dca50420.1
scaffold640	Augus-PASA	exon	27149	27568	.	+	.	ID=Dca50420.1.exon12;Parent=Dca50420.1