Carnation DB

Dca50426.1

Annotation

9-exons
f-1
sp|F6HCH3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0118g00420#GO:0016020;GO:0043169;GO:0016798;GO:0005975#2F1P1C
Os06t0179000-01 Glycoside hydrolase family 79, N-terminal protein.
Repeat List (scaffold640)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50426.1	12	526	526	67.11	515	67	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HCH3_VITVI	22	548	548	96.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50426.1	2	525	526	62.35	524	63	0
Target_name	Start	End	Length	Cov(%)
Os06t0179000-01	10	525	527	97.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold640	Augus-PASA	mRNA	73973	78393	.	+	.	ID=Dca50426.1;Parent=Dca50426
scaffold640	Augus-PASA	exon	73973	74167	.	+	.	ID=Dca50426.1.exon1;Parent=Dca50426.1
scaffold640	Augus-PASA	exon	76386	76422	.	+	.	ID=Dca50426.1.exon2;Parent=Dca50426.1
scaffold640	Augus-PASA	exon	76509	76692	.	+	.	ID=Dca50426.1.exon3;Parent=Dca50426.1
scaffold640	Augus-PASA	exon	76787	76935	.	+	.	ID=Dca50426.1.exon4;Parent=Dca50426.1
scaffold640	Augustus	exon	77041	77274	.	+	.	ID=Dca50426.1.exon5;Parent=Dca50426.1
scaffold640	Augustus	exon	77360	77549	.	+	.	ID=Dca50426.1.exon6;Parent=Dca50426.1
scaffold640	Augustus	exon	77637	77762	.	+	.	ID=Dca50426.1.exon7;Parent=Dca50426.1
scaffold640	Augustus	exon	77837	77936	.	+	.	ID=Dca50426.1.exon8;Parent=Dca50426.1
scaffold640	Augustus	exon	78028	78393	.	+	.	ID=Dca50426.1.exon9;Parent=Dca50426.1