Dca50435.1
Annotation
- 4-exons
- f-1
- sp|Q84K82_ARATH#Oxidoreductase, 2OG-Fe(II) oxygenase family protein#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At5g20400#GO:0005829;GO:0016706;GO:0016702#2F0P1C
- Repeat List (scaffold640)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50435.1 |
20 |
360 |
362 |
46.4 |
341 |
50 |
2e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q84K82_ARATH |
9 |
348 |
348 |
97.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50435.1 |
20 |
360 |
362 |
46.4 |
341 |
50 |
1e-96
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G20400.1 |
9 |
348 |
348 |
97.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold640 |
Augustus |
mRNA |
110579 |
111916 |
. |
+ |
. |
ID=Dca50435.1;Parent=Dca50435 |
| scaffold640 |
Augustus |
exon |
110579 |
110851 |
. |
+ |
. |
ID=Dca50435.1.exon1;Parent=Dca50435.1 |
| scaffold640 |
Augustus |
exon |
110927 |
111171 |
. |
+ |
. |
ID=Dca50435.1.exon2;Parent=Dca50435.1 |
| scaffold640 |
Augustus |
exon |
111268 |
111595 |
. |
+ |
. |
ID=Dca50435.1.exon3;Parent=Dca50435.1 |
| scaffold640 |
Augustus |
exon |
111674 |
111916 |
. |
+ |
. |
ID=Dca50435.1.exon4;Parent=Dca50435.1 |
