Dca50443.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold6402)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50443.1 |
1 |
303 |
330 |
61.81 |
303 |
63 |
1e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
485 |
813 |
896 |
36.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50443.1 |
1 |
299 |
330 |
32.12 |
299 |
33 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
996 |
1311 |
1401 |
22.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6402 |
Augustus |
mRNA |
15827 |
16897 |
. |
+ |
. |
ID=Dca50443.1;Parent=Dca50443 |
| scaffold6402 |
Augustus |
exon |
15827 |
16493 |
. |
+ |
. |
ID=Dca50443.1.exon1;Parent=Dca50443.1 |
| scaffold6402 |
Augustus |
exon |
16572 |
16897 |
. |
+ |
. |
ID=Dca50443.1.exon2;Parent=Dca50443.1 |
