Carnation DB

Dca50462.1

Annotation

10-exons
f-1
sp|F6HT55_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g01960#GO:0005634#0F0P1C
AT5G46910.1 | Symbols: | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | chr5:19046888-19050880 FORWARD LENGTH=787
Repeat List (scaffold641)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50462.1	1	797	801	60.92	797	59	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HT55_VITVI	15	849	850	98.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50462.1	8	713	801	51.81	706	58	0
Target_name	Start	End	Length	Cov(%)
AT5G46910.1	47	725	787	86.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold641	Augustus	mRNA	53787	58979	.	-	.	ID=Dca50462.1;Parent=Dca50462
scaffold641	Augustus	exon	53787	54077	.	-	.	ID=Dca50462.1.exon1;Parent=Dca50462.1
scaffold641	Augustus	exon	54242	54502	.	-	.	ID=Dca50462.1.exon2;Parent=Dca50462.1
scaffold641	Augustus	exon	54608	55008	.	-	.	ID=Dca50462.1.exon3;Parent=Dca50462.1
scaffold641	Augustus	exon	55107	55502	.	-	.	ID=Dca50462.1.exon4;Parent=Dca50462.1
scaffold641	Augustus	exon	55739	56016	.	-	.	ID=Dca50462.1.exon5;Parent=Dca50462.1
scaffold641	Augustus	exon	56115	56194	.	-	.	ID=Dca50462.1.exon6;Parent=Dca50462.1
scaffold641	Augustus	exon	56283	56336	.	-	.	ID=Dca50462.1.exon7;Parent=Dca50462.1
scaffold641	Augustus	exon	57690	57909	.	-	.	ID=Dca50462.1.exon8;Parent=Dca50462.1
scaffold641	Augustus	exon	58000	58156	.	-	.	ID=Dca50462.1.exon9;Parent=Dca50462.1
scaffold641	Augustus	exon	58712	58979	.	-	.	ID=Dca50462.1.exon10;Parent=Dca50462.1