Dca5051.1
Annotation
- 2-exons
- f-1
- sp|Q850U9_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037J17.27#GO:0003676#1F0P0C
- Repeat List (scaffold11929)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5051.1 |
1 |
176 |
178 |
56.17 |
176 |
50 |
8e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q850U9_ORYSJ |
348 |
547 |
547 |
36.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5051.1 |
60 |
161 |
178 |
20.78 |
102 |
37 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1285 |
1382 |
1401 |
6.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11929 |
Augustus |
mRNA |
3598 |
4379 |
. |
- |
. |
ID=Dca5051.1;Parent=Dca5051 |
| scaffold11929 |
Augustus |
exon |
3598 |
3926 |
. |
- |
. |
ID=Dca5051.1.exon1;Parent=Dca5051.1 |
| scaffold11929 |
Augustus |
exon |
4172 |
4379 |
. |
- |
. |
ID=Dca5051.1.exon2;Parent=Dca5051.1 |
