Dca50511.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold642)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50511.1 |
171 |
415 |
419 |
36.27 |
245 |
57 |
3e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
475 |
744 |
1553 |
17.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50511.1 |
173 |
412 |
419 |
20.76 |
240 |
33 |
1e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
131 |
398 |
707 |
37.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold642 |
Augustus |
mRNA |
139994 |
141512 |
. |
+ |
. |
ID=Dca50511.1;Parent=Dca50511 |
| scaffold642 |
Augustus |
exon |
139994 |
140507 |
. |
+ |
. |
ID=Dca50511.1.exon1;Parent=Dca50511.1 |
| scaffold642 |
Augustus |
exon |
140696 |
141192 |
. |
+ |
. |
ID=Dca50511.1.exon2;Parent=Dca50511.1 |
| scaffold642 |
Augustus |
exon |
141264 |
141512 |
. |
+ |
. |
ID=Dca50511.1.exon3;Parent=Dca50511.1 |
