Carnation DB

Dca50526.1

Annotation

5-exons
f-1
sp|D7MD33_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_912862#unknown#0F0P0C
AT2G37210.2 | Symbols: | lysine decarboxylase family protein | chr2:15624253-15626834 REVERSE LENGTH=239
Repeat List (scaffold6424)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50526.1	2	200	200	52.5	199	53	2e-47
Target_name	Start	End	Length	Cov(%)
sp\|D7MD33_ARALL	79	221	225	63.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50526.1	2	179	200	52	178	59	4e-48
Target_name	Start	End	Length	Cov(%)
AT2G37210.2	84	232	239	62.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6424	Augustus	mRNA	11608	12936	.	+	.	ID=Dca50526.1;Parent=Dca50526
scaffold6424	Augustus	exon	11608	11713	.	+	.	ID=Dca50526.1.exon1;Parent=Dca50526.1
scaffold6424	Augustus	exon	12030	12191	.	+	.	ID=Dca50526.1.exon2;Parent=Dca50526.1
scaffold6424	Augustus	exon	12325	12395	.	+	.	ID=Dca50526.1.exon3;Parent=Dca50526.1
scaffold6424	Augustus	exon	12493	12636	.	+	.	ID=Dca50526.1.exon4;Parent=Dca50526.1
scaffold6424	Augustus	exon	12817	12936	.	+	.	ID=Dca50526.1.exon5;Parent=Dca50526.1