Dca50553.1
Annotation
- 2-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold643)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50553.1 |
24 |
273 |
279 |
63.08 |
250 |
71 |
5e-104
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
416 |
666 |
1333 |
18.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50553.1 |
25 |
274 |
279 |
43.01 |
250 |
48 |
5e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
467 |
718 |
1428 |
17.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold643 |
Augustus |
mRNA |
135384 |
136327 |
. |
+ |
. |
ID=Dca50553.1;Parent=Dca50553 |
| scaffold643 |
Augustus |
exon |
135384 |
136202 |
. |
+ |
. |
ID=Dca50553.1.exon1;Parent=Dca50553.1 |
| scaffold643 |
Augustus |
exon |
136307 |
136327 |
. |
+ |
. |
ID=Dca50553.1.exon2;Parent=Dca50553.1 |
