Dca50554.1
Annotation
- 2-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold643)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50554.1 |
6 |
487 |
489 |
66.87 |
482 |
64 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
814 |
1332 |
1333 |
38.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50554.1 |
10 |
468 |
489 |
46.42 |
459 |
46 |
1e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
888 |
1382 |
1401 |
35.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold643 |
Augustus |
mRNA |
136654 |
138233 |
. |
+ |
. |
ID=Dca50554.1;Parent=Dca50554 |
| scaffold643 |
Augustus |
exon |
136654 |
136953 |
. |
+ |
. |
ID=Dca50554.1.exon1;Parent=Dca50554.1 |
| scaffold643 |
Augustus |
exon |
137064 |
138233 |
. |
+ |
. |
ID=Dca50554.1.exon2;Parent=Dca50554.1 |
