Dca50607.1
Annotation
- 3-exons
- f-1
- sp|B9I7B3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570757#unknown#0F0P0C
- sp|G7KXH6_MEDTR#F-box/LRR-repeat protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g112570#unknown#0F0P0C
- Repeat List (scaffold645)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50607.1 |
53 |
188 |
191 |
33.5 |
136 |
48 |
8e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I7B3_POPTR |
289 |
424 |
646 |
21.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50607.1 |
53 |
188 |
191 |
30.36 |
136 |
43 |
8e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G27920.1 |
285 |
420 |
642 |
21.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold645 |
Augustus |
mRNA |
11273 |
13541 |
. |
+ |
. |
ID=Dca50607.1;Parent=Dca50607 |
| scaffold645 |
Augustus |
exon |
11273 |
11411 |
. |
+ |
. |
ID=Dca50607.1.exon1;Parent=Dca50607.1 |
| scaffold645 |
Augustus |
exon |
12714 |
12736 |
. |
+ |
. |
ID=Dca50607.1.exon2;Parent=Dca50607.1 |
| scaffold645 |
Augustus |
exon |
13128 |
13541 |
. |
+ |
. |
ID=Dca50607.1.exon3;Parent=Dca50607.1 |
