Carnation DB

Dca50609.1

Annotation

5-exons
f-1
sp|F6HC06_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00230#GO:0031227;GO:0016758#1F0P1C
sp|B9SLJ9_RICCO#Exostosin-2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0592150#GO:0031227;GO:0001888#1F0P1C
Repeat List (scaffold645)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50609.1	8	329	329	66.86	322	69	2e-135
Target_name	Start	End	Length	Cov(%)
sp\|F6HC06_VITVI	17	338	338	95.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50609.1	8	329	329	64.74	322	66	2e-125
Target_name	Start	End	Length	Cov(%)
AT3G55830.1	18	334	334	94.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold645	Augus-PASA	mRNA	41524	45437	.	+	.	ID=Dca50609.1;Parent=Dca50609
scaffold645	Augus-PASA	exon	41524	41720	.	+	.	ID=Dca50609.1.exon1;Parent=Dca50609.1
scaffold645	Augus-PASA	exon	43308	43704	.	+	.	ID=Dca50609.1.exon2;Parent=Dca50609.1
scaffold645	Augus-PASA	exon	44181	44344	.	+	.	ID=Dca50609.1.exon3;Parent=Dca50609.1
scaffold645	Augus-PASA	exon	44685	44755	.	+	.	ID=Dca50609.1.exon4;Parent=Dca50609.1
scaffold645	Augus-PASA	exon	45277	45437	.	+	.	ID=Dca50609.1.exon5;Parent=Dca50609.1