Carnation DB

Dca50610.1

Annotation

7-exons
f-1
sp|F6HC03_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00270#GO:0005840;GO:0003735;GO:0042254;GO:0006414#1F2P1C
sp|Q9M5M5_EUPES#60S acidic ribosomal protein PO#Euphorbia esula (Leafy spurge)#unknown#GO:0005840;GO:0003735;GO:0042254;GO:0006414#1F2P1C
Repeat List (scaffold645)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50610.1	1	320	390	67.69	320	83	1e-144
Target_name	Start	End	Length	Cov(%)
sp\|F6HC03_VITVI	1	319	320	99.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50610.1	1	320	390	63.07	320	77	2e-139
Target_name	Start	End	Length	Cov(%)
AT2G40010.1	1	316	317	99.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold645	Augus-PASA	mRNA	46785	52164	.	-	.	ID=Dca50610.1;Parent=Dca50610
scaffold645	Augus-PASA	exon	46785	46931	.	-	.	ID=Dca50610.1.exon1;Parent=Dca50610.1
scaffold645	Augustus	exon	49045	49114	.	-	.	ID=Dca50610.1.exon2;Parent=Dca50610.1
scaffold645	Augustus	exon	49187	49323	.	-	.	ID=Dca50610.1.exon3;Parent=Dca50610.1
scaffold645	Augus-PASA	exon	49649	50041	.	-	.	ID=Dca50610.1.exon4;Parent=Dca50610.1
scaffold645	Augus-PASA	exon	50280	50378	.	-	.	ID=Dca50610.1.exon5;Parent=Dca50610.1
scaffold645	Augus-PASA	exon	51628	51696	.	-	.	ID=Dca50610.1.exon6;Parent=Dca50610.1
scaffold645	Augus-PASA	exon	51907	52164	.	-	.	ID=Dca50610.1.exon7;Parent=Dca50610.1