Dca50615.1
Annotation
- 3-exons
- f-1
- sp|B9HSQ2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_567287#GO:0030132;GO:0030130;GO:0005198;GO:0006886;GO:0016192#1F2P2C
- AT2G40060.1 | Symbols: | Clathrin light chain protein | chr2:16726564-16728001 FORWARD LENGTH=258
- Repeat List (scaffold645)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50615.1 |
9 |
271 |
272 |
50.73 |
263 |
52 |
8e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HSQ2_POPTR |
3 |
250 |
252 |
98.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50615.1 |
64 |
259 |
272 |
46.32 |
196 |
61 |
2e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G40060.1 |
43 |
244 |
258 |
78.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold645 |
Augustus |
mRNA |
86746 |
89636 |
. |
+ |
. |
ID=Dca50615.1;Parent=Dca50615 |
| scaffold645 |
Augustus |
exon |
86746 |
87071 |
. |
+ |
. |
ID=Dca50615.1.exon1;Parent=Dca50615.1 |
| scaffold645 |
Augustus |
exon |
88549 |
88702 |
. |
+ |
. |
ID=Dca50615.1.exon2;Parent=Dca50615.1 |
| scaffold645 |
Augustus |
exon |
89298 |
89636 |
. |
+ |
. |
ID=Dca50615.1.exon3;Parent=Dca50615.1 |
