Dca50617.1
Annotation
- 3-exons
- f-1
- sp|D7T4R6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00570#unknown#0F0P0C
- AT2G40070.1 | Symbols: | BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:16728378-16731160 REVERSE LENGTH=607
- Repeat List (scaffold645)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50617.1 |
3 |
146 |
148 |
58.1 |
144 |
60 |
7e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7T4R6_VITVI |
1 |
144 |
545 |
26.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50617.1 |
3 |
146 |
148 |
48.64 |
144 |
50 |
4e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G40070.1 |
1 |
142 |
607 |
23.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold645 |
Augustus |
mRNA |
92708 |
94276 |
. |
- |
. |
ID=Dca50617.1;Parent=Dca50617 |
| scaffold645 |
Augustus |
exon |
92708 |
92834 |
. |
- |
. |
ID=Dca50617.1.exon1;Parent=Dca50617.1 |
| scaffold645 |
Augustus |
exon |
93800 |
93911 |
. |
- |
. |
ID=Dca50617.1.exon2;Parent=Dca50617.1 |
| scaffold645 |
Augustus |
exon |
94069 |
94276 |
. |
- |
. |
ID=Dca50617.1.exon3;Parent=Dca50617.1 |
