Dca50625.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6450)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50625.1 |
198 |
313 |
317 |
19.24 |
116 |
53 |
7e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
847 |
962 |
964 |
12.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50625.1 |
198 |
296 |
317 |
11.67 |
99 |
38 |
6e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1282 |
1378 |
1401 |
6.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6450 |
Augustus |
mRNA |
11101 |
14377 |
. |
- |
. |
ID=Dca50625.1;Parent=Dca50625 |
| scaffold6450 |
Augustus |
exon |
11101 |
11541 |
. |
- |
. |
ID=Dca50625.1.exon1;Parent=Dca50625.1 |
| scaffold6450 |
Augustus |
exon |
13433 |
13539 |
. |
- |
. |
ID=Dca50625.1.exon2;Parent=Dca50625.1 |
| scaffold6450 |
Augustus |
exon |
13972 |
14377 |
. |
- |
. |
ID=Dca50625.1.exon3;Parent=Dca50625.1 |
