Dca50667.1
Annotation
- 2-exons
- f-1
- sp|Q53K55_ORYSJ#Retrotransposon protein, putative, Ty1-copia sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g23750#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6465)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50667.1 |
148 |
325 |
352 |
36.07 |
178 |
72 |
7e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53K55_ORYSJ |
363 |
540 |
938 |
18.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50667.1 |
138 |
325 |
352 |
21.59 |
188 |
40 |
6e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
525 |
714 |
1428 |
13.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6465 |
Augustus |
mRNA |
18384 |
20107 |
. |
- |
. |
ID=Dca50667.1;Parent=Dca50667 |
| scaffold6465 |
Augustus |
exon |
18384 |
19000 |
. |
- |
. |
ID=Dca50667.1.exon1;Parent=Dca50667.1 |
| scaffold6465 |
Augustus |
exon |
19666 |
20107 |
. |
- |
. |
ID=Dca50667.1.exon2;Parent=Dca50667.1 |
