Dca50668.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6466)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50668.1 |
40 |
207 |
208 |
44.71 |
168 |
55 |
6e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
792 |
962 |
964 |
17.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50668.1 |
54 |
190 |
208 |
25.48 |
137 |
39 |
3e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1244 |
1378 |
1401 |
9.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6466 |
Augustus |
mRNA |
4860 |
9116 |
. |
- |
. |
ID=Dca50668.1;Parent=Dca50668 |
| scaffold6466 |
Augustus |
exon |
4860 |
5320 |
. |
- |
. |
ID=Dca50668.1.exon1;Parent=Dca50668.1 |
| scaffold6466 |
Augustus |
exon |
8951 |
9116 |
. |
- |
. |
ID=Dca50668.1.exon2;Parent=Dca50668.1 |
