Dca50690.1
Annotation
- 4-exons
- f-1
- sp|D7MVB8_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_683032#unknown#0F0P0C
- sp|Q6NLB6_ARATH#At4g13220#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At4g13220#unknown#0F0P0C
- Repeat List (scaffold647)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50690.1 |
16 |
169 |
169 |
49.7 |
154 |
53 |
8e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7MVB8_ARALL |
21 |
179 |
179 |
88.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50690.1 |
16 |
169 |
169 |
49.11 |
154 |
52 |
4e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G13220.1 |
18 |
176 |
176 |
90.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold647 |
Augustus |
mRNA |
108610 |
110656 |
. |
+ |
. |
ID=Dca50690.1;Parent=Dca50690 |
| scaffold647 |
Augustus |
exon |
108610 |
108820 |
. |
+ |
. |
ID=Dca50690.1.exon1;Parent=Dca50690.1 |
| scaffold647 |
Augustus |
exon |
110134 |
110195 |
. |
+ |
. |
ID=Dca50690.1.exon2;Parent=Dca50690.1 |
| scaffold647 |
Augustus |
exon |
110281 |
110385 |
. |
+ |
. |
ID=Dca50690.1.exon3;Parent=Dca50690.1 |
| scaffold647 |
Augustus |
exon |
110525 |
110656 |
. |
+ |
. |
ID=Dca50690.1.exon4;Parent=Dca50690.1 |
