Carnation DB

Dca50692.1

Annotation

5-exons
f-1
sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
Repeat List (scaffold6470)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50692.1	30	856	859	53.55	827	49	0
Target_name	Start	End	Length	Cov(%)
sp\|Q9LHM4_ARATH	551	1497	1499	63.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50692.1	43	859	859	43.77	817	40	0
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	554	1478	1539	60.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6470	Augustus	mRNA	3388	6320	.	-	.	ID=Dca50692.1;Parent=Dca50692
scaffold6470	Augustus	exon	3388	4461	.	-	.	ID=Dca50692.1.exon1;Parent=Dca50692.1
scaffold6470	Augustus	exon	4540	4767	.	-	.	ID=Dca50692.1.exon2;Parent=Dca50692.1
scaffold6470	Augustus	exon	4849	5011	.	-	.	ID=Dca50692.1.exon3;Parent=Dca50692.1
scaffold6470	Augustus	exon	5117	5544	.	-	.	ID=Dca50692.1.exon4;Parent=Dca50692.1
scaffold6470	Augustus	exon	5634	6320	.	-	.	ID=Dca50692.1.exon5;Parent=Dca50692.1