Dca50700.1
Annotation
- 3-exons
- f-1
- sp|A9NSW1_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold6474)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50700.1 |
28 |
115 |
125 |
36 |
88 |
46 |
8e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9NSW1_PICSI |
15 |
106 |
153 |
60.13 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50700.1 |
29 |
115 |
125 |
31.2 |
87 |
44 |
9e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G17080.1 |
19 |
106 |
154 |
57.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6474 |
Augustus |
mRNA |
8215 |
11562 |
. |
- |
. |
ID=Dca50700.1;Parent=Dca50700 |
| scaffold6474 |
Augustus |
exon |
8215 |
8274 |
. |
- |
. |
ID=Dca50700.1.exon1;Parent=Dca50700.1 |
| scaffold6474 |
Augustus |
exon |
9984 |
10060 |
. |
- |
. |
ID=Dca50700.1.exon2;Parent=Dca50700.1 |
| scaffold6474 |
Augustus |
exon |
11322 |
11562 |
. |
- |
. |
ID=Dca50700.1.exon3;Parent=Dca50700.1 |
