Dca50730.1
Annotation
- 4-exons
- f-3
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold6480)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50730.1 |
5 |
122 |
495 |
7.47 |
118 |
32 |
7e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B5U9F7_SOYBN |
49 |
163 |
1321 |
8.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50730.1 |
158 |
460 |
495 |
24.64 |
303 |
36 |
3e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
953 |
1290 |
1428 |
23.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6480 |
Augustus |
mRNA |
11902 |
18471 |
. |
- |
. |
ID=Dca50730.1;Parent=Dca50730 |
| scaffold6480 |
Augustus |
exon |
11902 |
12017 |
. |
- |
. |
ID=Dca50730.1.exon1;Parent=Dca50730.1 |
| scaffold6480 |
Augustus |
exon |
15005 |
15602 |
. |
- |
. |
ID=Dca50730.1.exon2;Parent=Dca50730.1 |
| scaffold6480 |
Augustus |
exon |
15796 |
16100 |
. |
- |
. |
ID=Dca50730.1.exon3;Parent=Dca50730.1 |
| scaffold6480 |
Augustus |
exon |
18001 |
18471 |
. |
- |
. |
ID=Dca50730.1.exon4;Parent=Dca50730.1 |
