Carnation DB

Dca50798.1

Annotation

9-exons
f-1
sp|B9N0M0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_742621#GO:0005737;GO:0016740;GO:0009072#1F1P1C
sp|Q84VH0_MALPU#Glutathione S-transferase Z1#Malva pusilla (Dwarf mallow)#unknown#GO:0005737;GO:0016740;GO:0009072#1F1P1C
Repeat List (scaffold65)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50798.1	3	215	215	67.44	213	69	2e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9N0M0_POPTR	7	219	225	94.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50798.1	1	215	215	61.86	215	60	5e-71
Target_name	Start	End	Length	Cov(%)
AT2G02390.3	2	223	228	97.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold65	Augus-PASA	mRNA	80681	85768	.	-	.	ID=Dca50798.1;Parent=Dca50798
scaffold65	Augus-PASA	exon	80681	80773	.	-	.	ID=Dca50798.1.exon1;Parent=Dca50798.1
scaffold65	Augus-PASA	exon	81238	81297	.	-	.	ID=Dca50798.1.exon2;Parent=Dca50798.1
scaffold65	Augus-PASA	exon	82996	83057	.	-	.	ID=Dca50798.1.exon3;Parent=Dca50798.1
scaffold65	Augus-PASA	exon	84009	84084	.	-	.	ID=Dca50798.1.exon4;Parent=Dca50798.1
scaffold65	Augus-PASA	exon	84186	84239	.	-	.	ID=Dca50798.1.exon5;Parent=Dca50798.1
scaffold65	Augus-PASA	exon	84913	84984	.	-	.	ID=Dca50798.1.exon6;Parent=Dca50798.1
scaffold65	Augus-PASA	exon	85108	85193	.	-	.	ID=Dca50798.1.exon7;Parent=Dca50798.1
scaffold65	Augus-PASA	exon	85526	85582	.	-	.	ID=Dca50798.1.exon8;Parent=Dca50798.1
scaffold65	Augustus	exon	85681	85768	.	-	.	ID=Dca50798.1.exon9;Parent=Dca50798.1