Carnation DB

Dca50817.1

Annotation

13-exons
f-1
sp|F6H414_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0068g00810#GO:0005524;GO:0008026;GO:0003684;GO:0006281#3F1P0C
AT2G01440.1 | Symbols: | DEAD/DEAH box RNA helicase family protein | chr2:193950-199056 REVERSE LENGTH=973
Repeat List (scaffold65)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50817.1	18	719	779	70.98	702	72	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H414_VITVI	23	790	823	93.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50817.1	44	718	779	66.88	675	71	0
Target_name	Start	End	Length	Cov(%)
AT3G02060.1	48	789	823	90.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold65	Augustus	mRNA	206257	215794	.	-	.	ID=Dca50817.1;Parent=Dca50817
scaffold65	Augustus	exon	206257	206318	.	-	.	ID=Dca50817.1.exon1;Parent=Dca50817.1
scaffold65	Augustus	exon	206692	206738	.	-	.	ID=Dca50817.1.exon2;Parent=Dca50817.1
scaffold65	Augustus	exon	206860	206933	.	-	.	ID=Dca50817.1.exon3;Parent=Dca50817.1
scaffold65	Augustus	exon	207287	207643	.	-	.	ID=Dca50817.1.exon4;Parent=Dca50817.1
scaffold65	Augustus	exon	208332	208505	.	-	.	ID=Dca50817.1.exon5;Parent=Dca50817.1
scaffold65	Augustus	exon	208600	208686	.	-	.	ID=Dca50817.1.exon6;Parent=Dca50817.1
scaffold65	Augustus	exon	210378	210448	.	-	.	ID=Dca50817.1.exon7;Parent=Dca50817.1
scaffold65	Augustus	exon	211126	211265	.	-	.	ID=Dca50817.1.exon8;Parent=Dca50817.1
scaffold65	Augustus	exon	211677	211801	.	-	.	ID=Dca50817.1.exon9;Parent=Dca50817.1
scaffold65	Augustus	exon	212076	212210	.	-	.	ID=Dca50817.1.exon10;Parent=Dca50817.1
scaffold65	Augustus	exon	213019	213264	.	-	.	ID=Dca50817.1.exon11;Parent=Dca50817.1
scaffold65	Augustus	exon	214007	214232	.	-	.	ID=Dca50817.1.exon12;Parent=Dca50817.1
scaffold65	Augustus	exon	215199	215794	.	-	.	ID=Dca50817.1.exon13;Parent=Dca50817.1