Carnation DB

Dca50820.1

Annotation

6-exons
f-1
sp|D7LDC2_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_900658#unknown#0F0P0C
Repeat List (scaffold65)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50820.1	21	171	171	41.52	151	45	6e-28
Target_name	Start	End	Length	Cov(%)
sp\|D7LDC2_ARALL	8	168	169	95.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50820.1	1	171	171	47.95	171	39	2e-25
Target_name	Start	End	Length	Cov(%)
AT2G33793.1	1	211	212	99.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold65	Augustus	mRNA	237660	240059	.	+	.	ID=Dca50820.1;Parent=Dca50820
scaffold65	Augustus	exon	237660	237775	.	+	.	ID=Dca50820.1.exon1;Parent=Dca50820.1
scaffold65	Augustus	exon	237890	237979	.	+	.	ID=Dca50820.1.exon2;Parent=Dca50820.1
scaffold65	Augustus	exon	238973	239032	.	+	.	ID=Dca50820.1.exon3;Parent=Dca50820.1
scaffold65	Augustus	exon	239144	239216	.	+	.	ID=Dca50820.1.exon4;Parent=Dca50820.1
scaffold65	Augustus	exon	239795	239893	.	+	.	ID=Dca50820.1.exon5;Parent=Dca50820.1
scaffold65	Augustus	exon	239982	240059	.	+	.	ID=Dca50820.1.exon6;Parent=Dca50820.1