Carnation DB

Dca50831.1

Annotation

5-exons
f-1
sp|B9SGT1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0819900#GO:0043565;GO:0003700#2F0P0C
sp|G7L1N8_MEDTR#WRKY transcription factor#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g100510#GO:0043565;GO:0003700#2F0P0C
Repeat List (scaffold65)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50831.1	324	387	392	9.43	64	58	3e-14
Target_name	Start	End	Length	Cov(%)
sp\|B9SGT1_RICCO	193	255	474	13.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50831.1	4	384	392	47.95	381	44	2e-70
Target_name	Start	End	Length	Cov(%)
AT2G37260.1	1	410	429	95.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold65	Augustus	mRNA	355460	357452	.	-	.	ID=Dca50831.1;Parent=Dca50831
scaffold65	Augustus	exon	355460	355610	.	-	.	ID=Dca50831.1.exon1;Parent=Dca50831.1
scaffold65	Augustus	exon	355864	356022	.	-	.	ID=Dca50831.1.exon2;Parent=Dca50831.1
scaffold65	Augus-PASA	exon	356248	356798	.	-	.	ID=Dca50831.1.exon3;Parent=Dca50831.1
scaffold65	Augus-PASA	exon	357056	357184	.	-	.	ID=Dca50831.1.exon4;Parent=Dca50831.1
scaffold65	Augus-PASA	exon	357264	357452	.	-	.	ID=Dca50831.1.exon5;Parent=Dca50831.1